* using log directory 'd:/Rcompile/CRANpkg/local/2.15/TIMP.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'TIMP/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'TIMP' version '1.10.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'TIMP' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'TIMP/R/zzz.R':
  .onLoad has wrong argument list 'lib, pack'

Package startup functions should have two arguments with names starting
  with 'lib' and 'pkg', respectively.
See section 'Good practice' in ?.onAttach.

barplot3: warning in matrix(w.m, nc = NC): partial argument match of
  'nc' to 'ncol'
fitModel: warning in rescomp(t = currModel@fit@nlsres$onls$m$getPars(),
  currModel = currModel): partial argument match of 't' to 'theta'
fitModel: warning in rescomp(t = currModel@fit@nlsres$onls$par,
  currModel = currModel): partial argument match of 't' to 'theta'
getStdErrClp: warning in assign("model", m[[dset]], env = numenv):
  partial argument match of 'env' to 'envir'
getStdErrClp: warning in assign("group", group, env = numenv): partial
  argument match of 'env' to 'envir'
getStdErrClp: warning in assign("rawtheta", rawtheta, env = numenv):
  partial argument match of 'env' to 'envir'
getStdErrClp: warning in assign("multimodel", multimodel, env =
  numenv): partial argument match of 'env' to 'envir'
getStdErrClp: warning in assign("thetalist", thetalist, env = numenv):
  partial argument match of 'env' to 'envir'
getStdErrClp: warning in assign("clpindepX", clpindepX, env = numenv):
  partial argument match of 'env' to 'envir'
getStdErrClp: warning in assign("finished", FALSE, env = numenv):
  partial argument match of 'env' to 'envir'
getStdErrClp: warning in assign("returnX", TRUE, env = numenv): partial
  argument match of 'env' to 'envir'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                          old_size new_size compress
  donorAcceptorTagged.rda    123Kb     66Kb    bzip2
  donorTagged.rda            126Kb     70Kb    bzip2
  target.rda                  80Kb     69Kb       xz
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386' OK
  Running 'example2nd.R'
  Running 'kin_sim_large_script.R'
  Running 'kin_simple_ir_script.R'
  Running 'kin_simple_visible_script.R'
  Running 'kin_target_script.R'
  Running 'spectral_script.R'
** running tests for arch 'x64' OK
  Running 'example2nd.R'
  Running 'kin_sim_large_script.R'
  Running 'kin_simple_ir_script.R'
  Running 'kin_simple_visible_script.R'
  Running 'kin_target_script.R'
  Running 'spectral_script.R'
* checking PDF version of manual ... OK
WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  'd:/Rcompile/CRANpkg/local/2.15/TIMP.Rcheck/00check.log'
for details.